bin_PROGRAMS=test_permutations							\
	test_aa_util								\
	daliesque_indexer daliesque_query 					\
	daliesque2_indexer daliesque2_query 					\
	test_substitution_matrix						

lib_LIBRARIES=libaaneighborhood.a
test_permutations_SOURCES=test_perm.c permutations.c

test_aa_util_SOURCES=test_aa_util.c
daliesque_indexer_SOURCES=daliesque_indexer.c
daliesque_query_SOURCES=daliesque_query.c
test_substitution_matrix_SOURCES=test_substitution_matrix.c

LDADD=libaaneighborhood.a ../query_handler/libqueryhandler.a ../m_tree/libmtree.a ../bulk_storage/libbulkstorage.a ../metric/libmetric.a ../pdb_index/libpdbindex.a

libaaneighborhood_a_SOURCES=permutations.c 	neighborhood_indexer.c aa_util.c translationRotation.c daliesque.c daliesque2.c substitution_matrix.c
